Epitope Prediction Services
Expert Computational Epitope Mapping for Vaccines & Therapeutics
At Biointelix, we specialize in advanced epitope prediction services designed to accelerate your vaccine design, antibody discovery, and immunotherapy development. Our immunoinformatics pipeline leverages cutting-edge algorithms and structural biology to identify high-confidence B-cell and T-cell epitopes.
What is an Epitope?
An epitope—or antigenic determinant—is the specific region of an antigen recognized by the immune system (B cells, T cells, or antibodies). Predicting epitopes enables targeted vaccine design and the development of diagnostic and therapeutic biologics.
Types of Epitopes
- Linear (Continuous) Epitopes: Identified by sequence-based analysis, ideal for peptide vaccines and diagnostics.
- Conformational (Discontinuous) Epitopes: Require 3D structure modeling; critical for antibody binding and immune response.
Both epitope types are essential in immune recognition and targeted biomedical design
Why Epitope Prediction Matters
Our epitope prediction services help researchers::
- Minimize wet-lab trial-and-error
- Identify top candidate regions for immunogenicity
- Support rational vaccine and antibody design
- Streamline cancer immunotherapy and autoimmune research
- Perform allergenicity and HLA population coverage analysis
Biointelix Epitope Prediction Services
We offer end-to-end epitope prediction solutions tailored for research teams, biotech companies, and pharmaceutical developers.
B-Cell Epitope Prediction
Linear B-Cell Epitope Mapping
Using sequence-based analysis, we identify linear epitopes for use in subunit and peptide vaccines.
Conformational Epitope Prediction
Structure-based algorithms model discontinuous epitopes to support neutralizing antibody development
Case Example: HA RBD of Influenza A Virus
Biointelix identifies high-specificity B-cell epitopes on hemagglutinin (HA), aiding precision vaccine targeting.
Table containing Predicted Linear B-cell epitopes

At Biointelix, we offer state-of-the-art epitope prediction services powered by cutting-edge bioinformatics tools and expert scientific insight. Our services are designed to support your immunological research and development pipeline from early discovery through preclinical design.
Image representing Predicted Discontinous B-cell Epitopes

Using 3D structure-based computational tools, Biointelix predicts conformational (discontinuous) B-cell epitopes on the HA RBD of Influenza A. Our epitope prediction services help researchers target structural epitopes crucial for neutralizing antibody responses.
T-Cell Epitope Prediction
MHC Class I & II Binding Predictions
Tools like NetMHCpan and IEDB predict strong CTL and helper T-cell epitopes.
Case Example: CTL Epitopes from Influenza A RBD
We map T-cell epitopes with high MHC binding confidence for use in personalized immunotherapy and mRNA vaccines.
Table listed Cytotoxic T Lymphocyte (CTL) Epitope Prediction

Biointelix identifies cytotoxic T lymphocyte (CTL) epitopes from the Influenza A HA RBD using immunoinformatic pipelines. Our epitope prediction services support T-cell-based vaccine design and immunotherapy development with high-confidence MHC-binding predictions.
Additional Features
Epitope Mapping from FASTA or PDB
Upload a sequence or structure—we’ll deliver a full epitope map.
Population Coverage & Allergenicity
Assess immunogenicity, allergenicity, and HLA coverage for global vaccine effectiveness.
Custom Reports & Data Visualization
Get detailed, publication-ready outputs with interactive epitope mapping visuals.
Why Choose Biointelix for Epitope Prediction Services?
- Immunoinformatics Expertise: Deep experience in B-/T-cell epitope mapping
- Flexible Input Options: Accept FASTA, genome, or 3D structures
- Fast Turnaround: Rapid results with high accuracy
- Confidential & Secure: Your data is safe with us
Ready to Accelerate Your Research?
Partner with Biointelix to access accurate and customizable epitope prediction services that streamline biomedical research and development.
- Email: info@biotelix.com
- Website: www.biointelix.com
- Contact: Get in touch